endrov.typeLineage.util
Class LineageMergeUtil

java.lang.Object
  endrov.typeLineage.util.LineageMergeUtil

public class LineageMergeUtil
extends java.lang.Object

Utilities for merging lineages

Constructor Summary

LineageMergeUtil()

Method Summary

static javax.vecmath.Vector3d	getLastPosABa(Lineage refLin)
static javax.vecmath.Vector3d	getLastPosABp(Lineage refLin)
static void	mapExpression(Lineage fromLin, Lineage toLin, java.lang.String fromExpName, java.lang.String toExpName) Take the expression pattern from one lineage to another by remapping the time of each individual cell
static Lineage	mapModelToRec(Lineage reflin, Lineage intoLin) Super-impose standard model onto recording by rotation, scaling and changing times
static CoordinateSystem	singlecellCSfromLin(Lineage refLin) Set up coordinate system

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

LineageMergeUtil

public LineageMergeUtil()

Method Detail

mapExpression

public static void mapExpression(Lineage fromLin,
                                 Lineage toLin,
                                 java.lang.String fromExpName,
                                 java.lang.String toExpName)

Take the expression pattern from one lineage to another by remapping the time of each individual cell

mapModelToRec

public static Lineage mapModelToRec(Lineage reflin,
                                    Lineage intoLin)

Super-impose standard model onto recording by rotation, scaling and changing times

singlecellCSfromLin

public static CoordinateSystem singlecellCSfromLin(Lineage refLin)

Set up coordinate system

getLastPosABp

public static javax.vecmath.Vector3d getLastPosABp(Lineage refLin)

getLastPosABa

public static javax.vecmath.Vector3d getLastPosABa(Lineage refLin)