endrov.ioOMERO
Class EvIODataOMERO

java.lang.Object
  endrov.ioOMERO.EvIODataOMERO

All Implemented Interfaces:

EvIOData

public class EvIODataOMERO
extends java.lang.Object
implements EvIOData

Support for proprietary formats through LOCI Bioformats

Nested Class Summary

static class	EvIODataOMERO.OMEROChannelMap
class	EvIODataOMERO.SliceIO Image I/O class *

Field Summary

OMEROConnection

connection Instance *

Constructor Summary

EvIODataOMERO(OMEROConnection connection, EvData d)

Method Summary

void	buildDatabase(EvData d) Scan recording for channels
void	close()
java.io.File	datadir() Directory for auxiliary data.
java.lang.String	getMetadataName() TODO in next iteration * blobs * new image format
RecentReference	getRecentEntry() Get entry for Load Recent or null if not possible
void	populateChannel(pojos.ImageData imd, EvChannel ch, EvIODataOMERO.OMEROChannelMap m)
void	saveData(EvData d, EvData.FileIOStatusCallback cb) Save data

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

connection

public OMEROConnection connection

Instance *

Constructor Detail

EvIODataOMERO

public EvIODataOMERO(OMEROConnection connection,
                     EvData d)

Method Detail

populateChannel

public void populateChannel(pojos.ImageData imd,
                            EvChannel ch,
                            EvIODataOMERO.OMEROChannelMap m)

buildDatabase

public void buildDatabase(EvData d)

Description copied from interface: EvIOData

Scan recording for channels

Specified by:

buildDatabase in interface EvIOData

datadir

public java.io.File datadir()

Description copied from interface: EvIOData

Directory for auxiliary data. null if one does not exist

Specified by:

datadir in interface EvIOData

getMetadataName

public java.lang.String getMetadataName()

Description copied from interface: EvIOData

TODO in next iteration * blobs * new image format

Specified by:

getMetadataName in interface EvIOData

getRecentEntry

public RecentReference getRecentEntry()

Description copied from interface: EvIOData

Get entry for Load Recent or null if not possible

Specified by:

getRecentEntry in interface EvIOData

saveData

public void saveData(EvData d,
                     EvData.FileIOStatusCallback cb)

Description copied from interface: EvIOData

Save data

Specified by:

saveData in interface EvIOData

close

public void close()
           throws java.io.IOException

Specified by:

close in interface EvIOData

Throws:

java.io.IOException